Crystal structure of SmyD3 in complex with covalent inhibitor 1
Baburajendran, N., Anna E, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Smyd3 methyltransferase | 423 | Homo sapiens | Mutation(s): 0  | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9H7B4 (Homo sapiens) Explore Q9H7B4  Go to UniProtKB:  Q9H7B4 | |||||
PHAROS:  Q9H7B4 GTEx:  ENSG00000185420  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9H7B4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SAM Query on SAM | B [auth A] | S-ADENOSYLMETHIONINE C15 H22 N6 O5 S MEFKEPWMEQBLKI-FCKMPRQPSA-N | |||
8NR Query on 8NR | F [auth A] | ethyl 4-(5,6,7,8-tetrahydroacridin-3-ylcarbonyl)piperazine-1-carboxylate C21 H25 N3 O3 YMYFCDFYTNCCDJ-UHFFFAOYSA-N | |||
ZN Query on ZN | C [auth A], D [auth A], E [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 61.458 | α = 90 |
b = 66.472 | β = 90 |
c = 107.062 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
SCALA | data scaling |
PDB_EXTRACT | data extraction |