Complex of Dot1l with SS148
Yu, W., Tempel, W., Li, Y., Spurr, S.S., Bayle, E.D., Fish, P.V., Schapira, M., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Brown, P.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Histone-lysine N-methyltransferase, H3 lysine-79 specific | 421 | Homo sapiens | Mutation(s): 0  Gene Names: DOT1L, KIAA1814, KMT4 EC: 2.1.1.43 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8TEK3 (Homo sapiens) Explore Q8TEK3  Go to UniProtKB:  Q8TEK3 | |||||
PHAROS:  Q8TEK3 GTEx:  ENSG00000104885  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8TEK3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
6NR Query on 6NR | X [auth A] | (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-5-cyano-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid C16 H20 N6 O5 S XLTWYAYAFLGUEQ-OPYVMVOTSA-N | |||
UNX Query on UNX | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | UNKNOWN ATOM OR ION X |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 153.258 | α = 90 |
b = 153.258 | β = 90 |
c = 50.723 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |