Structure of USP7 with a novel viral protein
Chavoshi, S., Egorova, O., Lacdao, I.K., Farhadi, S., Sheng, Y., Saridakis, V.(2016) J Biol Chem 
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
(2016) J Biol Chem 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ubiquitin carboxyl-terminal hydrolase 7 | 143 | Homo sapiens | Mutation(s): 0  Gene Names: USP7, HAUSP EC: 3.4.19.12 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q93009 (Homo sapiens) Explore Q93009  Go to UniProtKB:  Q93009 | |||||
PHAROS:  Q93009 GTEx:  ENSG00000187555  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q93009 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
SER-PRO-GLY-GLU-GLY-PRO-SER-GLY | 8 | Human gammaherpesvirus 8 | Mutation(s): 0  | ![]() | |
UniProt | |||||
Find proteins for F5HF68 (Human herpesvirus 8 type P (isolate GK18)) Explore F5HF68  Go to UniProtKB:  F5HF68 | |||||
Entity Groups   | |||||
UniProt Group | F5HF68 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 69.975 | α = 90 |
b = 69.975 | β = 90 |
c = 45.444 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
MOSFLM | data reduction |
Aimless | data scaling |
PHASER | phasing |
RESOLVE | phasing |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
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Canadian Institutes of Health Research (CIHR) | Canada | 106583 |