Download MendeleyCrystal structure of a ring oxydation complex/ phenylacetic acid degradation-like protein (SSO1313) from Sulfolobus solfataricus P2 at 2.43 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
4MUD
Crystal structure of a ring oxydation complex/ phenylacetic acid degradation-like protein (SSO1313) from Sulfolobus solfataricus P2 at 2.43 A resolution
- PDB DOI: https://doi.org/10.2210/pdb4MUD/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Saccharolobus solfataricus P2
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2013-09-21 Released: 2013-10-09
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.43 Å
- R-Value Free: 0.203
- R-Value Work: 0.181
- R-Value Observed: 0.182
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ring oxydation complex/ phenylacetic acid degradation related protein | 235 | Saccharolobus solfataricus P2 | Mutation(s): 0 Gene Names: SSO1313 |  | |
UniProt | |||||
Find proteins for Q97YL0 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)) Explore Q97YL0 Go to UniProtKB: Q97YL0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q97YL0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | E [auth C] F [auth C] G [auth C] H [auth C] I [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.43 Å
- R-Value Free: 0.203
- R-Value Work: 0.181
- R-Value Observed: 0.182
- Space Group: P 1
- Diffraction Data: https://doi.org/10.18430/M34MUD
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 52.73 | α = 80.29 |
| b = 64.25 | β = 70.08 |
| c = 77.01 | γ = 86.42 |
| Software Name | Purpose |
|---|---|
| MolProbity | model building |
| PDB_EXTRACT | data extraction |
| SOLVE | phasing |
| XSCALE | data scaling |
| BUSTER-TNT | refinement |
| XDS | data reduction |
| BUSTER | refinement |
Entry History
Deposition Data
- Released Date: 2013-10-09 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2013-10-09
Type: Initial release - Version 1.1: 2017-11-15
Changes: Refinement description - Version 1.2: 2018-01-24
Changes: Database references - Version 1.3: 2023-02-01
Changes: Database references, Derived calculations - Version 1.4: 2024-10-16
Changes: Data collection, Structure summary
