Crystal structure MBD4 MBD domain in complex with methylated CpG DNA
Xu, C., Tempel, W., Wernimont, A.K., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Methyl-CpG-binding domain protein 4 | 68 | Homo sapiens | Mutation(s): 0  Gene Names: MBD4, MED1 EC: 3.2.2 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O95243 (Homo sapiens) Explore O95243  Go to UniProtKB:  O95243 | |||||
PHAROS:  O95243 GTEx:  ENSG00000129071  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O95243 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
UNX Query on UNX | D [auth A] E [auth A] F [auth A] G [auth B] H [auth B] | UNKNOWN ATOM OR ION X |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 49.367 | α = 90 |
b = 78.209 | β = 90 |
c = 40.557 | γ = 90 |
Software Name | Purpose |
---|---|
SCALA | data scaling |
PHASER | phasing |
BUSTER-TNT | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
BUSTER | refinement |