Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature
Doctrow, B.M., Schlessman, J.L., Garcia-Moreno E., B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Thermonuclease | 143 | Staphylococcus aureus | Mutation(s): 6  Gene Names: nuc EC: 3.1.31.1 | ||
UniProt | |||||
Find proteins for P00644 (Staphylococcus aureus) Explore P00644  Go to UniProtKB:  P00644 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00644 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MRD Query on MRD | F [auth A], G [auth A], I [auth B], J [auth B] | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N | |||
PO4 Query on PO4 | C [auth A], D [auth A], H [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
CA Query on CA | E [auth A], K [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 46.595 | α = 90 |
b = 63.755 | β = 91.92 |
c = 49.874 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
CBASS | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |