Crystal structure of NIF3 superfamily protein from Sphaerobacter thermophilus
Michalska, K., Tesar, C., Clancy, S., Otwinowski, Z., Joachimiak, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NIF3 protein | 278 | Sphaerobacter thermophilus DSM 20745 | Mutation(s): 0  Gene Names: Sthe_0840 | ||
UniProt | |||||
Find proteins for D1C210 (Sphaerobacter thermophilus (strain ATCC 49802 / DSM 20745 / KCCM 41009 / NCIMB 13125 / S 6022)) Explore D1C210  Go to UniProtKB:  D1C210 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D1C210 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ACT Query on ACT | AA [auth F] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
FMT Query on FMT | BA [auth F] G [auth A] I [auth A] J [auth A] K [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
CL Query on CL | H [auth A] L [auth B] O [auth B] R [auth C] T [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 187.77 | α = 90 |
b = 96.483 | β = 115.28 |
c = 128.47 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
MOLREP | phasing |
BUSTER | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |