3PV0
Crystal Structure of a pre-translocation state MBP-Maltose transporter complex without nucleotide
- PDB DOI: https://doi.org/10.2210/pdb3PV0/pdb
- Classification: TRANSPORT PROTEIN, MEMBRANE PROTEIN
- Organism(s): Escherichia coli K-12
- Expression System: Escherichia coli
- Mutation(s): Yes 
- Membrane Protein: Yes  PDBTMMemProtMDmpstruc
- Deposited: 2010-12-06 Released: 2011-05-18 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.10 Å
- R-Value Free: 0.274 
- R-Value Work: 0.231 
- R-Value Observed: 0.233 
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose transporter subunit; periplasmic-binding component of ABC superfamily | A [auth E] | 370 | Escherichia coli K-12 | Mutation(s): 2  Gene Names: ECDH10B_4223, malE Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AEX9 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose transporter subunit; membrane component of ABC superfamily | B [auth F] | 514 | Escherichia coli K-12 | Mutation(s): 0  Gene Names: ECDH10B_4222, malF Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P02916 (Escherichia coli (strain K12)) Explore P02916  Go to UniProtKB:  P02916 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02916 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose transporter subunit; membrane component of ABC superfamily | C [auth G] | 296 | Escherichia coli K-12 | Mutation(s): 0  Gene Names: ECDH10B_4221, malG Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P68183 (Escherichia coli (strain K12)) Explore P68183  Go to UniProtKB:  P68183 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68183 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Fused maltose transport subunit, ATP-binding component of ABC superfamily; regulatory protein | D [auth A], E [auth B] | 381 | Escherichia coli K-12 | Mutation(s): 0  Gene Names: ECDH10B_4224, malK Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P68187 (Escherichia coli (strain K12)) Explore P68187  Go to UniProtKB:  P68187 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68187 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PGV Query on PGV | H [auth F] | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE C40 H77 O10 P ADYWCMPUNIVOEA-GPJPVTGXSA-N |
Biologically Interesting Molecules (External Reference) 1 Unique
Entity ID: 5 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900001 Query on PRD_900001 | F [auth C], G [auth D] | alpha-maltose | Oligosaccharide / Nutrient |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.10 Å
- R-Value Free: 0.274 
- R-Value Work: 0.231 
- R-Value Observed: 0.233 
- Space Group: P 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 78.543 | α = 90.48 |
b = 92.63 | β = 102.13 |
c = 119.132 | γ = 104.21 |
Software Name | Purpose |
---|---|
HKL-2000 | data collection |
PHASER | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
Entry History 
Deposition Data
- Released Date: 2011-05-18  Deposition Author(s): Oldham, M.L., Chen, J.
Revision History (Full details and data files)
- Version 1.0: 2011-05-18
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Database references, Derived calculations, Non-polymer description, Structure summary - Version 2.1: 2023-09-06
Changes: Data collection, Database references, Refinement description, Structure summary