2ERM
Solution structure of a biologically active human FGF-1 monomer, complexed to a hexasaccharide heparin-analogue
- PDB DOI: https://doi.org/10.2210/pdb2ERM/pdb
- Classification: HORMONE/GROWTH FACTOR
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No 
- Deposited: 2005-10-25 Released: 2006-10-03 
Experimental Data Snapshot
- Method: SOLUTION NMR
- Conformers Calculated: 30 
- Conformers Submitted: 20 
- Selection Criteria: structures with the lowest energy 
wwPDB Validation   3D Report Full Report
This is version 2.0 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Heparin-binding growth factor 1 | 139 | Homo sapiens | Mutation(s): 0  Gene Names: FGF1, FGFA | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P05230 (Homo sapiens) Explore P05230  Go to UniProtKB:  P05230 | |||||
PHAROS:  P05230 GTEx:  ENSG00000113578  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P05230 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-acetamido-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid | B | 6 | N/A | ||
Glycosylation Resources | |||||
GlyTouCan:  G09918ME GlyCosmos:  G09918ME |
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
IPA Query on IPA | C [auth A] | ISOPROPYL ALCOHOL C3 H8 O KFZMGEQAYNKOFK-UHFFFAOYSA-N |
Experimental Data & Validation
Experimental Data
- Method: SOLUTION NMR
- Conformers Calculated: 30 
- Conformers Submitted: 20 
- Selection Criteria: structures with the lowest energy 
Entry History 
Deposition Data
- Released Date: 2006-10-03  Deposition Author(s): Canales, A., Lozano, R., Nieto, P.M., Martin-Lomas, M., Gimenez-Gallego, G., Jimenez-Barbero, J.
Revision History (Full details and data files)
- Version 1.0: 2006-10-03
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Structure summary