1VKK

Crystal structure of Glia maturation factor-gamma (GMFG) from Mus musculus at 1.50 A resolution

• PDB DOI: https://doi.org/10.2210/pdb1VKK/pdb

• Classification: HORMONE/GROWTH FACTOR
• Organism(s): Mus musculus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2004-05-27 Released: 2004-08-17 
• Deposition Author(s): Joint Center for Structural Genomics (JCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.35 Å
• R-Value Free: 0.194 
• R-Value Work: 0.158 
• R-Value Observed: 0.160 

Starting Model: experimental

Literature

Crystal structure of Glia maturation factor-gamma (GMFG) from Mus musculus at 1.50 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 18.33 kDa 
• Atom Count: 1,342 
• Modelled Residue Count: 137 
• Deposited Residue Count: 154 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glia maturation factor gamma	A	154	Mus musculus	Mutation(s): 0  Gene Names: GMFG
UniProt & NIH Common Fund Data Resources
Find proteins for Q9ERL7 (Mus musculus) Explore Q9ERL7  Go to UniProtKB:  Q9ERL7
IMPC:  MGI:1927135

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PO4	B [auth A]	PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.35 Å
• R-Value Free: 0.194 
• R-Value Work: 0.158 
• R-Value Observed: 0.160 
• Space Group: P 1
• Diffraction Data: https://doi.org/10.18430/M31VKK

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 29.049	α = 69.95
b = 34.605	β = 87.51
c = 38.365	γ = 70.46

Software Package:

Software Name	Purpose
MOSFLM	data reduction
SCALA	data scaling
MOLREP	phasing
REFMAC	refinement
CCP4	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-08-17 
Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Revision History  

• Version 1.0: 2004-08-17
  Type: Initial release
  
• Version 1.1: 2008-04-26
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Advisory, Version format compliance
• Version 1.3: 2023-01-25
  Changes: Database references, Derived calculations
• Version 1.4: 2023-09-20
  Changes: Data collection, Refinement description