November 2008 Molecule of the Month by David Goodsell
Keywords: ion channels, mechanosensitive channel, osmotic pressure
We are remarkably resistant to changes in our surrounding environment. Our bulky bodies allow us to weather extremes of heat and cold, and our skin protects us if we go for a swim in fresh water or salty water. If things get too uncomfortable, we can always get up and walk away, finding a warmer or cooler or drier place. Bacteria don't have as many options. They are tiny and they are immersed in water, so changes in the environment can pose life-threatening challenges. For instance, if it rains they may be suddenly surrounded by fresh water. This is dangerous because the water seeps into the cell through osmosis and increases the pressure inside. At other times, the bacterium may be shifted suddenly to salty conditions, which pulls water out and dehydrates the cell. Bacteria have methods for resisting these changes, so they can keep a steady, comfortable osmotic pressure inside.
Bacteria control their internal pressure by changing the concentration of molecules inside. If they are placed in salty conditions, they resist dehydration by transporting ions into the cell and by synthesizing more small molecules. However, if they are placed in pure water, they must reduce their inner concentration of ions and small molecules. In that case, they use mechanosensitive channels that open and allow small molecules to leak out. For instance, in laboratory tests, cells that are placed in fresh water rapidly lose more than 95% of small molecules like amino acids, sugars, and potassium ions. However, they keep their proteins or ribosomes safely inside, so they recover quickly and can start up protein synthesis minutes after the conditions return to normal.
Mechanosensitive channels respond to pressure inside the cell, opening when it gets to dangerous levels. They sense this pressure by sensing changes in the properties of the membrane. When the membrane is stretched by high internal pressures, it triggers the conformational change that opens the channel. The cell has several different channels that open at different levels of pressure. The MscS channel shown here (PDB entry 2oau) opens at low and moderate pressures, and the one on the following page opens at higher pressures.
MscS, the mechanosensitive channel of small conductance, is composed of seven identical chains arranged to form a tube. A portion of it crosses the membrane and forms a pressure-sensitive pore about 13 Angstroms in diameter. This is just big enough to pass small molecules and ions. The cytoplasmic portion (shown at the bottom here) forms a cap over the pore, creating an antechamber that limits the size of molecules that can reach the pore when it opens.
MscL, the mechanosensitive channel of large conductance (PDB entry 2oar), comes into play in dire emergencies, when the pressure gets so high that the cell might burst. It opens to form a larger pore than the MscS channel with an opening of 30-40 Angstroms. It is composed of five identical chains that open like a camera iris when the cell membrane is stretched tightly. The structure shown here is the closed form. To see models of the opening of this channel, take a look at the page at Proteopedia.
click on the above Jmol tab for an interactive visualization
Exploring the Structure
You can see MscS in action in two PDB files: the closed form is shown on the left from PDB entry 2oau, and the open form is shown on the right from PDB entry 2vv5. In both pictures, we are looking down the pore. Two leucine amino acids in each chain, shown in white, form a circular gate that blocks passage in the closed form. It may look like this ring of amino acids is open enough to allow passage, but since these amino acids are so hydrophobic, they actually block the movement of water molecules. This ring has been termed a "vapor seal" because of this resistance to wetting by water. You can click on the pictures here for an interactive Jmol version.
Additional reading about Mechanosensitive Channels
- C.S. Gandhi and D.C.Rees (2008) Opening the molecular floodgates. Science 321, 1166-1167.
- I.R. Booth, M.D. Edwards, S. Black, U. Schumann and S. Miller (2007) Mechanosensitive channels in bacteria: signs of closure? Nature Reviews Microbiology 5, 431-440.
- A. Anishkin and C. Kung (2005) Microbial mechanosensation. Current Opinion in Neurobiology 15, 397-405.
- C. Kung (2005) A possible unifying principle for mechanosensation. Nature 436, 647-654.
- E. Perozo and D. C. Rees (2003) Structure and mechanism in prokaryotic mechanosensitive channels. Current Opinion in Structural Biology 13, 432-442.
© 2015 David Goodsell & RCSB Protein Data Bank